PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI41117.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WOX
Protein Properties Length: 75aa    MW: 9089.32 Da    PI: 11.0472
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI41117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.73.9e-181511257
                HHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox 12 leeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                l++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  MCI41117.1  1 LRALEELYRRgTRTPSAEQIQQITAQLrrfgKIEGKNVFYWFQNHKARERQ 51
                689******99**************************************97 PP
2Wus_type_Homeobox95.54.4e-312531465
  Wus_type_Homeobox 14 kiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       + Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+
         MCI41117.1  2 RALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKR 53
                       78************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
LRALEELYRR GTRTPSAEQI QQITAQLRRF GKIEGKNVFY WFQNHKARER QKRRRQMESA  60
ADHQFDATLE KKDLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-34WOX family protein