PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI41495.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 116aa    MW: 13098.1 Da    PI: 10.4744
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI41495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.31.5e-211766255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  MCI41495.1 17 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 66
                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
PISMKHVGNN PSKPTKLYRG VRQRHWGKWV AEIRLPKNRT RLWLGTFDTA EEAALAYDKA  60
AYKLRGDFAR LNFPNLKHQG SSIGCEFGEF KPLPSSVDAK LQAICEGLAE MQKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-52ERF family protein