PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI42996.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 113aa    MW: 12542.2 Da    PI: 10.8188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI42996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-181767155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s ++GVr +k +g++v+eIr p++   r+r++lg++++ae+Aa+a +aa+ +l+g
  MCI42996.1 17 SLFRGVRKRK-WGKYVSEIRLPNS---RQRIWLGSYDSAEKAARAFDAAMFCLRG 67
                569****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MVKTNVEKPA TERSDASLFR GVRKRKWGKY VSEIRLPNSR QRIWLGSYDS AEKAARAFDA  60
AMFCLRGSGA KFNFPGDPPN IAGGRSMTPS QIQEAAARFA NSDIHNEKPG RPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-45ERF family protein