PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI43281.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GeBP
Protein Properties Length: 108aa    MW: 12376.9 Da    PI: 9.8559
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI43281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57374.91.4e-2325107293
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                   qr++ eeDe+++L+Gl df +kt+k+p +d +af++fvkks+ ++++++ql  K+r LKkKf++           sf+k+hd+k+fel k
  MCI43281.1  25 SHQRIFREEDELTILKGLADFISKTKKDPLKDASAFHSFVKKSLRAEANSEQLKRKVRTLKKKFETSD---------SFTKPHDKKAFELFK 107
                 579*************************************************************8643.........68**********977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
TGGGSDDENE TEEDVKLTGE DSKKSHQRIF REEDELTILK GLADFISKTK KDPLKDASAF  60
HSFVKKSLRA EANSEQLKRK VRTLKKKFET SDSFTKPHDK KAFELFKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-19GeBP family protein