PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI44009.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 59aa MW: 6807 Da PI: 11.0488

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI44009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.4	3.9e-06	21	57	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R++i +++ eLr ++P+ +K s + L ++++Y+ L MCI44009.1 21 RQQIQDCIKELRGIIPHG-----GKCSIDSLLDRTIRYMLFL 57 89***************8.....7888889999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 59 aa Download sequence
MRPSKNKAKP GESTRPRPKD RQQIQDCIKE LRGIIPHGGK CSIDSLLDRT IRYMLFLRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	5e-25	bHLH family protein