PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI47128.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 106aa    MW: 12125.7 Da    PI: 10.513
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI47128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.91.1e-2526105278
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwev 78 
                 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+  +++ +r+r++tr+gCka+l vk+++ +gkw v
  MCI47128.1  26 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASLSVKMHDsSGKWIV 105
                 ****************************************998888545677889*****************99****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
VYFPEAGDLE PSEGMEFESE EAAKAFYNSY ARRVGFSTRV SSSRRSRRDG AIIQRQFVCA  60
KEGFRNLNEK RTKDREIKRP RTVTRVGCKA SLSVKMHDSS GKWIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-35FAR1 family protein