PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI48742.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 81aa    MW: 9171.3 Da    PI: 9.5772
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI48742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-173781249
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                +ykGVr+++ +g+++AeIrdp++ g  +r++lg++ t+eeAa a+++a
  MCI48742.1 37 RYKGVRRRP-WGKFAAEIRDPKKHG--ARVWLGTYLTEEEAALAYDKA 81
                8********.**********98765..*******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
LLITSTDDQS LPSPKSDNNS DTIVEAREIS APPTWKRYKG VRRRPWGKFA AEIRDPKKHG  60
ARVWLGTYLT EEEAALAYDK A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-23ERF family protein