PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI49108.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family M-type_MADS
Protein Properties Length: 47aa    MW: 5304.22 Da    PI: 11.1435
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI49108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF641.6e-201147339
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
                + +   rqvtfskRr g++KKA+ELS+LC+aeva+++
  MCI49108.1 11 VRDPNTRQVTFSKRRSGLFKKANELSILCGAEVAIVV 47
                566778*****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 47 aa     Download sequence    
MGRRKIEIES VRDPNTRQVT FSKRRSGLFK KANELSILCG AEVAIVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.13e-20M-type_MADS family protein