PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI49654.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 49aa    MW: 5157.55 Da    PI: 3.4705
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI49654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind31.54.7e-101848232
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES- CS
  HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvld 32
                  Fl k+ye+++d+ ++e++swsen+nsf+v++
    MCI49654.1 18 FLVKTYEMVDDSCTDEIVSWSENNNSFIVWN 48
                  9*****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    
MESSTSGGGG GGGSPAPFLV KTYEMVDDSC TDEIVSWSEN NNSFIVWNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13980.12e-14HSF family protein