PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI49722.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 102aa    MW: 11602.2 Da    PI: 11.4201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI49722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-181464255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+++AeIrdps   k  r++lg+f  + +Aaka++ a+ +++g
  MCI49722.1 14 HYRGVRRRP-WGKFAAEIRDPSR--KGSRVWLGTFNNEIDAAKAYDCAAFRMRG 64
                8********.**********854..34**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
VLEKKEQRCY GGKHYRGVRR RPWGKFAAEI RDPSRKGSRV WLGTFNNEID AAKAYDCAAF  60
RMRGQKAILN FPLEAGKANP KPNNSVSGRK RRIHQRDAAT SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.19e-39ERF family protein