PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI50612.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 91aa    MW: 10659.2 Da    PI: 10.4703
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI50612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.13.1e-3527754128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +ek+wyfF++rd+ky+tg+r+nrat+sgyWkatgkdke+++  +++lvg+kktLvfykgrap+gekt+Wvmhe+rl
  MCI50612.1   2 GEKDWYFFCQRDRKYPTGTRTNRATESGYWKATGKDKEIYKGkSNQLVGMKKTLVFYKGRAPRGEKTNWVMHEFRL 77 
                 5789************************************9756677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MGEKDWYFFC QRDRKYPTGT RTNRATESGY WKATGKDKEI YKGKSNQLVG MKKTLVFYKG  60
RAPRGEKTNW VMHEFRLDGK LATCNLPKDA K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.15e-51NAC family protein