PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI50617.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 79aa    MW: 8056.98 Da    PI: 10.8596
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI50617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.1e-055476223
                EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                +C+ C+k+F++   L++H +  H
  MCI50617.1 54 TCGSCSKTFNSETGLQQHSKAkH 76
                8*****************98777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
SASKTPVPSK KSKNATPEKT DGKKAGHTAT PHPKKGGKTP TTDGKSPKSG GQLTCGSCSK  60
TFNSETGLQQ HSKAKHGAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-09C2H2 family protein