PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI51775.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 91aa    MW: 10850.3 Da    PI: 10.3178
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI51775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.58.3e-31285686
                ..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
          B3  6 tpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                tpsdv+k++rlv+pk++ae++   ++++ +++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ +
  MCI51775.1  2 TPSDVGKLNRLVIPKQYAEKYfplDSSNDKGILLNFEDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFHRGR 85
                79**********************66777999*************************************************654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
VTPSDVGKLN RLVIPKQYAE KYFPLDSSND KGILLNFEDR NGKMWRFRYS YWNSSQSYVM  60
TKGWSRFVKD KKLDAGDIVS FHRGRHESYR H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.13e-51B3 family protein