PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI51944.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 95aa    MW: 10718 Da    PI: 10.7813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI51944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-18756255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  MCI51944.1  7 RYRGVRRRP-WGRYAAEIRDPA----SkERRWLGTFDTAEEAACAYDCAARAMRG 56
                69*******.**********83....25999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
GNGGALRYRG VRRRPWGRYA AEIRDPASKE RRWLGTFDTA EEAACAYDCA ARAMRGIKAR  60
TNFVYPTPPT PHTTTFPSFN FPKHSQTNRH VSTCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-14ERF family protein