PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI54275.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 59aa    MW: 6527.11 Da    PI: 4.6956
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI54275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind32.42.5e-102458236
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHH CS
  HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeef 36
                  Fl+k+y++++d++++++isw+++g+sf+v++++ f
    MCI54275.1 24 FLTKTYHLVDDRTINDVISWNDTGTSFIVWNPTVF 58
                  9******************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    
MAPSAEHNAN SSTGESQRST PTPFLTKTYH LVDDRTINDV ISWNDTGTSF IVWNPTVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-19HSF family protein