PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI54496.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 62aa    MW: 6751.78 Da    PI: 9.9476
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI54496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA67.21.7e-211549135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                Cs+Cg+tkTp+WR gp g+ktLCnaCG++y++ +l
  MCI54496.1 15 CSHCGVTKTPQWRTGPVGPKTLCNACGVRYKSGRL 49
                *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    
MSLQDGEGRG VPRRCSHCGV TKTPQWRTGP VGPKTLCNAC GVRYKSGRLL PEYRPACSPT  60
FS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-30GATA family protein