PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI55239.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 59aa    MW: 6508.55 Da    PI: 9.0761
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI55239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26045.12.8e-14956149
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal 49
                +CaaCk  r+kC+++C++ p+fpa +  ++a +h++F+++++  +++a+
  MCI55239.1  9 SCAACKQRRKKCNQECIMKPHFPAGD-TRWADIHQVFSNERLKAMMEAV 56
                6***********************98.799****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    
MAGRGGGGSC AACKQRRKKC NQECIMKPHF PAGDTRWADI HQVFSNERLK AMMEAVGIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.12e-11LBD family protein