PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI58906.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HB-other
Protein Properties Length: 72aa    MW: 8091.09 Da    PI: 4.6414
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI58906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.61.2e-093071344
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44
                k+++++ eq+++Le+ Fe  +++  e++ +LA+ l+L+ rqV
  MCI58906.1 30 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQV 71
                456899***********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MSFSSGIELG EEANIAEEDL SDDGSQAGEK KRRLNMEQVK TLEKSFELGN KLEPERKMQL  60
ARALNLQPRQ VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.13e-31HD-ZIP family protein