PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI60785.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB
Protein Properties Length: 89aa    MW: 10528.5 Da    PI: 10.5711
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI60785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.51.9e-15853248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g W   Ede+l+ av ++G+++W++I++ +  ++++kqck rw+ +l
       MCI60785.1  8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53
                     78*****************************.************986 PP
2Myb_DNA-binding23.81e-076086229
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIar 29
                       WT eEde+l+++ k++++  W+tIa 
       MCI60785.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAP 86
                     68*****************99.****96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.13e-59MYB family protein