PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI66228.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 82aa    MW: 9286.42 Da    PI: 4.4301
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI66228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS59.47.6e-19481151229
        GRAS 151 esgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLk 229
                 e++++e+l+++ge+L + Ae+l++ fef+v v+++l++l+ e+L +++++ laVn++++l+r++desvs+e++rd++L+
  MCI66228.1   4 ENDDEERLKTVGENLGRQAERLRIGFEFKV-VTQKLAELTRESLGCDSEDILAVNFAFKLFRMPDESVSTENPRDALLR 81 
                 4669*************************9.799*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
AVAENDDEER LKTVGENLGR QAERLRIGFE FKVVTQKLAE LTRESLGCDS EDILAVNFAF  60
KLFRMPDESV STENPRDALL RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.13e-25GRAS family protein