PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI67566.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C3H

Protein Properties

Length: 64aa MW: 7023.86 Da PI: 5.5299

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI67566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	44	3.8e-14	38	63	2	27
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 +++ C++f+ tGtCkyG+ CkF+H++ MCI67566.1 38 DQPDCKYFMSTGTCKYGSDCKFHHPK 63 789*********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 64 aa Download sequence
MPSGFIGSNL VYDYMNPAAG ETLSGGQVMN STLPDRPDQP DCKYFMSTGT CKYGSDCKFH 60 HPKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18550.1	1e-13	C3H family protein