PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI68248.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 82aa    MW: 8896.15 Da    PI: 10.3589
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI68248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.84.7e-125182236
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f
  MCI68248.1 51 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTF 82
                8********.***********9987..*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
GWVPSLDVGS PESFSSSGFM PAVIVKSEPE VQSSSEIIVS VPVDVPAKGK HYRGVRRRPW  60
GKFAAEIRDP AKNGARVWLG TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-22ERF family protein