PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI77446.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 54aa    MW: 5853.8 Da    PI: 11.4236
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI77446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS35.31.6e-11154319374
        GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++aGF+  p+s+k+a+++k+ l   +    +v+ee+g +++gW++r+L+++SaWr
  MCI77446.1   1 MSMAGFRLNPVSQKVAESIKARLVPGS--RVTVNEENGGVCFGWMGRTLTVASAWR 54 
                 899****************99775554..589***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 54 aa     Download sequence    
MSMAGFRLNP VSQKVAESIK ARLVPGSRVT VNEENGGVCF GWMGRTLTVA SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-20GRAS family protein