PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI78997.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 66aa    MW: 7584.63 Da    PI: 10.6206
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI78997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.5e-21250355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +grW AeI+dp+   +rkr++lg+f taeeAa+ +++a+ k++g
  MCI78997.1  2 YRGVRQRP-WGRWTAEICDPN---QRKRVWLGTFNTAEEAAAKYDEAAVKFKG 50
                9*******.**********93...36**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MYRGVRQRPW GRWTAEICDP NQRKRVWLGT FNTAEEAAAK YDEAAVKFKG SKAVTNFPNR  60
PAVKDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.17e-20ERF family protein