PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI79263.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 75aa    MW: 8770.01 Da    PI: 10.4588
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI79263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix61.91.5e-19974162
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkryk 62
                +W+ +e+laLi+ +r+++ +l+rg+lk+++W+ev++++         +++p+qC++k+e+l+kry+
  MCI79263.1  9 CWSPDETLALIDSYRDKWYSLGRGNLKATHWQEVADAVsqrcPNASPSKTPVQCRHKMEKLRKRYR 74
                8*********************************999966656667799****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
STRRLPPPCW SPDETLALID SYRDKWYSLG RGNLKATHWQ EVADAVSQRC PNASPSKTPV  60
QCRHKMEKLR KRYRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.13e-38Trihelix family protein