PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI79596.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 68aa    MW: 8128.32 Da    PI: 10.3177
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI79596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS44.62.3e-14265310373
        GRAS 310 etlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 et+++W+ r ++aGFk+++++++ ++++k ++++ + + + v+e+ ++++ gWk+r L ++SaW
  MCI79596.1   2 ETYKQWQLRNRRAGFKQIRFDSDLVNEIKVMVKREYHKDFAVDEDGKWVLHGWKGRVLNALSAW 65 
                 899*********************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
PETYKQWQLR NRRAGFKQIR FDSDLVNEIK VMVKREYHKD FAVDEDGKWV LHGWKGRVLN  60
ALSAWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46600.12e-24GRAS family protein