PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI80600.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 70aa    MW: 7822.94 Da    PI: 10.6236
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI80600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-191369255
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.....krkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr++  +g+WvAeIr+p + g     k  r +lg+f ta eAa a+++a+k+++g
  MCI80600.1 13 NFRGVRQRI-WGKWVAEIREPIN-GkhvgeKAHRLWLGTFSTAHEAALAYDKAAKAMYG 69
                69****998.**********855.44876666*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MRGKGGPQNS DCNFRGVRQR IWGKWVAEIR EPINGKHVGE KAHRLWLGTF STAHEAALAY  60
DKAAKAMYGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.16e-21ERF family protein