PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI83951.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YC
Protein Properties Length: 61aa    MW: 6715.69 Da    PI: 4.9112
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI83951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC81.79.1e-261613093
       NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93
                +kadedv+m+s +aPv+l+kace+fi elt+rs +h+   k +tl+k+diaaav+ t++fdflv
  MCI83951.1  1 MKADEDVRMVSEDAPVILAKACEMFISELTIRSRNHS---KTTTLQKNDIAAAVAGTNTFDFLV 61
                9********************************9996...678*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MKADEDVRMV SEDAPVILAK ACEMFISELT IRSRNHSKTT TLQKNDIAAA VAGTNTFDFL  60
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-26NF-YC family protein