PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI86935.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 71aa    MW: 8196.3 Da    PI: 5.4795
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI86935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS64.71.9e-20170177247
        GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqead 247
                 efn+ v    ++++le+++++p+Ea+aVn++l+lh+++desv+++++rd++L+l k++sPkvv++veqe +
  MCI86935.1   1 EFNA-VRVPASEVQLEDFELRPDEAVAVNFALMLHHIPDESVNIHNHRDRLLRLAKHISPKVVTLVEQEFN 70 
                 6898.688999**********************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
EFNAVRVPAS EVQLEDFELR PDEAVAVNFA LMLHHIPDES VNIHNHRDRL LRLAKHISPK  60
VVTLVEQEFN T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.13e-28GRAS family protein