PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G05430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 161aa    MW: 17333.2 Da    PI: 10.7767
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G05430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822144.97.1e-45381482110
           DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 
                      +s r+pt++ErEnn++RERrRR++a++iyaGLRa ++y+lpk+aD+n+Vl+ALc+eAG++v+dDG++ r+++++l  + + +g s+++ + ss+
  OGLUM01G05430.1  38 TSLRHPTARERENNRQRERRRRQVATRIYAGLRAGAGYALPKHADQNDVLRALCAEAGYLVDDDGNVSRRHDERLaGAGAGGGGSSDQLQVSSY 131
                      789************************************************************************999999************* PP

           DUF822  95 q.sslkssalaspvesy 110
                      +  +  + a++ + +++
  OGLUM01G05430.1 132 SgATEAAVAIQHQEQEK 148
                      96666666666555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MAPGTKAVAA AAGRRGCIRS TRGPWTVRRR GRGGGGTTSL RHPTAREREN NRQRERRRRQ  60
VATRIYAGLR AGAGYALPKH ADQNDVLRAL CAEAGYLVDD DGNVSRRHDE RLAGAGAGGG  120
GSSDQLQVSS YSGATEAAVA IQHQEQEKEI SLELTLSFTY M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.51e-08BES1 family protein