PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G06090.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 219aa    MW: 22703.1 Da    PI: 7.5561
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G06090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.1e-30106164159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYG+K vk+s++pr+YYrC+ agC vkk+ver+ +dp++v++tY g Hnh 
  OGLUM01G06090.1 106 LDDGFKWRKYGKKAVKSSPNPRNYYRCSAAGCGVKKRVERDGDDPRYVVTTYDGVHNHA 164
                      59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAASLGLCHE TSYAYSYPAS NTSSSLCFPP LMADHIVDGG GGGGCSFGEF LELGHSVYSL  60
PLPPPPWQPV VVAGGNNDQY GVSSSSSAAA TTSRIGFRTR SEVEVLDDGF KWRKYGKKAV  120
KSSPNPRNYY RCSAAGCGVK KRVERDGDDP RYVVTTYDGV HNHATPGCVG GGGHLSYPTS  180
AAPAWSVPAA AASPPPAHAQ AWGAPLHAAA AAHSSESSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.19e-38WRKY family protein