PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G06390.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 502aa MW: 55939.3 Da PI: 9.2019

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G06390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113	3.1e-35	96	238	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78 lp+G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ OGLUM01G06390.1 96 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtecdvqK 187 799**********.99**9996775553333333666646******.555666799**************7566666443 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l OGLUM01G06390.1 188 GETRWHKTGKTRPVMV-SGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 238 3778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MYTSPTLLAL SFALLLLILL LYYSSSLLYS QLATRRRLTH ACARSLPDAY ESGMNRGHIS 60 SSELIDAKLE ERRISTAKHC PSCGNKLDCK PDWVGLPAGV KFDPTDQELI EHLEAKVREE 120 GSRSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH FFHRPSKAYT TGTRKRRKIQ 180 TECDVQKGET RWHKTGKTRP VMVSGRQKGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGD 240 LEEEKEGELV VCKIFYQTQP RQCSWSSDRG GGAAATASAV TTAAVQQDQQ RRRDSGSGSC 300 SSTRDHEVSA TSYSTAGYAV AAAVEMQHLK HAADHFSFAP FRKSFEEVGI SGDQVHSNQL 360 GRSEQQHAGQ EQQPHRPLLA TTTAVPATAF LISRPTNPVS NIVPPAMQHA SVVLDHDQFH 420 VPAILLHHDK FQQQQQQKLD RRSAGLEELI MGCTSSSTKG VVYTCTFRKL QFLTPKRQNG 480 LTSHTGLLTT RIIMDSSNKA GK

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MYTSPTLLAL SFALLLLILL LYYSSSLLYS QLATRRRLTH ACARSLPDAY ESGMNRGHIS  60
SSELIDAKLE ERRISTAKHC PSCGNKLDCK PDWVGLPAGV KFDPTDQELI EHLEAKVREE  120
GSRSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH FFHRPSKAYT TGTRKRRKIQ  180
TECDVQKGET RWHKTGKTRP VMVSGRQKGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGD  240
LEEEKEGELV VCKIFYQTQP RQCSWSSDRG GGAAATASAV TTAAVQQDQQ RRRDSGSGSC  300
SSTRDHEVSA TSYSTAGYAV AAAVEMQHLK HAADHFSFAP FRKSFEEVGI SGDQVHSNQL  360
GRSEQQHAGQ EQQPHRPLLA TTTAVPATAF LISRPTNPVS NIVPPAMQHA SVVLDHDQFH  420
VPAILLHHDK FQQQQQQKLD RRSAGLEELI MGCTSSSTKG VVYTCTFRKL QFLTPKRQNG  480
LTSHTGLLTT RIIMDSSNKA GK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-117	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G06390.1