PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G06520.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 222aa MW: 22965.3 Da PI: 9.6214

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G06520.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.2	3.6e-38	33	87	4	58
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 + l+cprC+stntkfCyynny+l+qPr+fCkaCrryWt+GGalrnvPvGgg+r++ OGLUM01G06520.1 33 EGLACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTRNK 87 6789*************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MLLMEVAEGR TVAAAATAAG GGGLGGGART EAEGLACPRC ESTNTKFCYY NNYNLAQPRH 60 FCKACRRYWT RGGALRNVPV GGGTRNKVAP APCTGRRKRA GHATHAAAPT TTTQAPAVSS 120 APLPLMPPAV AYELPFLPPP PPLPLTAVDP DRRLLDLGGS FTSLLAPAQL HNGHFTTGFL 180 LGTMSSPPPP PPPATSAPSP APAAHPPVSD SIWAMGWPHL SI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21270.1	4e-31	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G06520.1