PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G06940.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 97aa    MW: 10787.5 Da    PI: 10.6606
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G06940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM255.3e-08834127
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkk 27
                     lppG+rF+P d+elv++yL ++ ++++
  OGLUM01G06940.1  8 LPPGVRFDPADDELVSRYLLRRRRSRR 34
                     79*****************99988777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MAAAADGLPP GVRFDPADDE LVSRYLLRRR RSRRRIGDRV AQVVLQFAKD DDIGFGGSHS  60
AQVLLSRDRK LTPITALLRK TMSMPVFLVA CYLQDAS