PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G07430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 228aa    MW: 24572.5 Da    PI: 6.419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G07430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.8e-174694355
              AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  OGLUM01G07430.1 46 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDVAALSIKG 94
                     9****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAASEQSSES SSTASTSSCG KKQQVAGKRK REDVGGGAEQ AAAVAYRGVR MRAWGKWVSE  60
IREPRKKSRI WLGTFPCPEM AARAHDVAAL SIKGARAVLN FPDLAPALPR PASLAPRDVQ  120
AAAALAAVMH HHKHPSSSTS TSSPPAAPPP DEHHPRHEPQ QPESSREDDQ QQQPAAAAAA  180
QMAVAELVFD ELAPLWVEDV VEFGTSDHCW TAYDALDPIG FQPLLWEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-28ERF family protein