PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G11690.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 549aa MW: 59782.4 Da PI: 4.6177

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G11690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.7e-40	162	221	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s OGLUM01G11690.1 162 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSS 221 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MCDKDPGIKL FGRVIPLAPE AEAAAAADGS DQPEAAAAAE VEPAAQDEDH HKETEESKDD 60 EMKVDVPQEE EDNEMKVDAP QEKKDNEVTA DVPEEKGNDE MRVDASESIE SIEPVSRSTL 120 DNKKEDQGQM NNVEEKAASD SKDENEKTAN DESGQDKVLK KPDKILPCPR CNSMDTKFCY 180 YNNYNVNQPR HFCKNCQRYW TAGGTMRNVP VGAGRRKSKS SSLHYRHLLM APDCMMGSRV 240 EISKSMNPEA FASAHSTPIQ PIGRNETVLK FGPEVPLCES MASVLNIQEQ NGTNAAAVPT 300 GENQEDNSCI SSITSHNVLP ENAAQVDKNS TPVYCNGVGP VLQYYLGAPY MYPWNIGWNN 360 VPMMVPGTSM PESASQSESC STSSAPWMNM NSPMMPVASR LSTPPFPYPL VPPALWGCLS 420 SWPATAWNIP WIRTNGGCMS PSSSSNSSCS GNGSPLGKHS RDDSLPLKED KEEKSLWVPK 480 TLRIDDPDEA AKSSIWATLG IKPGDPGIFK PFQSKGESKG QAASETRPAR ALKANPAALS 540 RSQSFQETS

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MCDKDPGIKL FGRVIPLAPE AEAAAAADGS DQPEAAAAAE VEPAAQDEDH HKETEESKDD  60
EMKVDVPQEE EDNEMKVDAP QEKKDNEVTA DVPEEKGNDE MRVDASESIE SIEPVSRSTL  120
DNKKEDQGQM NNVEEKAASD SKDENEKTAN DESGQDKVLK KPDKILPCPR CNSMDTKFCY  180
YNNYNVNQPR HFCKNCQRYW TAGGTMRNVP VGAGRRKSKS SSLHYRHLLM APDCMMGSRV  240
EISKSMNPEA FASAHSTPIQ PIGRNETVLK FGPEVPLCES MASVLNIQEQ NGTNAAAVPT  300
GENQEDNSCI SSITSHNVLP ENAAQVDKNS TPVYCNGVGP VLQYYLGAPY MYPWNIGWNN  360
VPMMVPGTSM PESASQSESC STSSAPWMNM NSPMMPVASR LSTPPFPYPL VPPALWGCLS  420
SWPATAWNIP WIRTNGGCMS PSSSSNSSCS GNGSPLGKHS RDDSLPLKED KEEKSLWVPK  480
TLRIDDPDEA AKSSIWATLG IKPGDPGIFK PFQSKGESKG QAASETRPAR ALKANPAALS  540
RSQSFQETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-70	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G11690.1