PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G16180.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 130aa    MW: 14007.8 Da    PI: 9.9458
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G16180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.88.3e-202155135
             GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                     C+ C++t+Tp+WR+gp g+++LCnaCG++yrkk++
  OGLUM01G16180.1 21 CVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRR 55
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MGSTDRKVVG IGVAEEGRRS CVECRATTTP MWRSGPTGPR SLCNACGIRY RKKRRQDLGL  60
DLNQPQKQEH GEVIPEVKDS NSNSNSNSGS GNSSSNLQVV PKRRLLMGVE EAALLLMTLS  120
SPSASTLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.13e-18GATA family protein