PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G18710.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 265aa    MW: 28818.2 Da    PI: 8.1439
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G18710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.81.7e-09592033128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev..ikev.diykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknra.......tksg 81 
                       Gf+  Pt  elv ++L+++++g ++   +v  i    d   + P dL +    +++ + + e ++F++r++  + + r++ a        + g
  OGLUM01G18710.1  59 TGFQDTPTVGELVLRHLRPRLRGFHCADGDVpvIGVRdDPAAAAPLDLVArhggAADRR-RgEAFYFVRRRRCRRPNVRRTVAeggggggGAGG 151
                      69999*******************9766565424444699********74334322223.2588999999887765555544456666655589 PP

              NAM  82 yWka..tgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                       Wk+  tg+ k+v++ +  + + k+   fy   +g + ++    Wv+ ey++
  OGLUM01G18710.1 152 LWKKswTGSGKSVTDLGVVVPWSKTCYCFYrrdEGGRLSTFGGGWVLAEYEI 203
                      9**645899******888888999999***43333444445679******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MAICAAAADH SRASPSSAAT QPTTICWRPS KVKEEVEEDG MVVDPPDDAS EASDNLRATG  60
FQDTPTVGEL VLRHLRPRLR GFHCADGDVP VIGVRDDPAA AAPLDLVARH GGAADRRRGE  120
AFYFVRRRRC RRPNVRRTVA EGGGGGGGAG GLWKKSWTGS GKSVTDLGVV VPWSKTCYCF  180
YRRDEGGRLS TFGGGWVLAE YEITEPGTYR RADEEEDDDD YWVLCHVRKT ASKKRKRNRC  240
DEAVAARAVA GTESKSYLVC GLTAN