PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G26760.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MYB_related
Protein Properties Length: 89aa    MW: 10259.5 Da    PI: 6.5152
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G26760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.5e-113374447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +T+eE +l  + +++ G++ W++Ia +++ gRt+k++  +w +y
  OGLUM01G26760.1 33 FTEEEKDLVFRMHRLVGNR-WELIAGRIP-GRTAKEVEMFWAQY 74
                     9******************.*********.********999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MDSSSGSQGK NSKTSDGCET KEVNNTAQNF VHFTEEEKDL VFRMHRLVGN RWELIAGRIP  60
GRTAKEVEMF WAQYTGGEIW CLETFPRRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01060.16e-21MYB_related family protein