PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G26760.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MYB_related
Protein Properties Length: 78aa    MW: 8897.91 Da    PI: 7.6192
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G26760.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.6e-103371444
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +T+eE +l  + +++ G++ W++Ia +++ gRt+k++  +w
  OGLUM01G26760.2 33 FTEEEKDLVFRMHRLVGNR-WELIAGRIP-GRTAKEVEMFW 71
                     9******************.*********.******98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MDSSSGSQGK NSKTSDGCET KEVNNTAQNF VHFTEEEKDL VFRMHRLVGN RWELIAGRIP  60
GRTAKEVEMF WAVKHQNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01060.13e-22MYB_related family protein