PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G29620.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 402aa    MW: 44714 Da    PI: 6.8529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G29620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.55.4e-19521868128
              NAM   8 hPtdeelvveyLkkkvegkk......lelee...vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratk..sgyWk 84 
                      hP+++el+  yL+++v + +          +   +i+e+d+y+++P dL +      + +++++ wyfFs  +    +g rk r+++  +g W+
  OGLUM01G29620.1  52 HPSEQELIETYLRPRVVSGDkpppssS---ScgfIIHEADVYSADPADLTRgfapavARSSGDEAWYFFSAVRGL--KGGRKARTVDdgAGCWH 140
                      9*************9877765766543...14437**************8557777544558889*****98775..588999976644788** PP

              NAM  85 atgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                      +    k+vl++ +g+  g ++++ f ++ ++ + +++ W+m e +l
  OGLUM01G29620.1 141 SEAGAKPVLAAsSGRRLGHRQSFSFITKdDDGQRVRSGWLMVELSL 186
                      9999999998868889**********5436667789*****99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MGAASRPRRQ CRAPRRLDGG GGGSMDVHPS ELLRRSRCTA PRRLDDDEMD VHPSEQELIE  60
TYLRPRVVSG DKPPPSSSSC GFIIHEADVY SADPADLTRG FAPAVARSSG DEAWYFFSAV  120
RGLKGGRKAR TVDDGAGCWH SEAGAKPVLA ASSGRRLGHR QSFSFITKDD DGQRVRSGWL  180
MVELSLDVDE EEQLVLSKVY FSPRAPGAKK PTTAAAMSRH KRKLSTTDIA SPPRRQRRHR  240
VVPSSPPEEP NTSPSPAAAP PDQQEGGDDD PDRGSISWWL RRVFGLTATF TEEESIELNP  300
WLKDILWPFP PPLPPTPPPP CPSPRRKLID MPEIREFILR GSYLGGGPAP PRYECDHPAM  360
VMTGGDDQQQ LDEQRRDDVG DDRAHYDRVD GQLQFERHYL RM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-10NAC family protein