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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OGLUM01G30020.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family | Dof | ||||||||
| Protein Properties | Length: 132aa MW: 13439.9 Da PI: 8.4952 | ||||||||
| Description | Dof family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-Dof | 36.9 | 7.8e-12 | 79 | 100 | 5 | 26 |
zf-Dof 5 alkcprCdstntkfCyynnysl 26
l+cprC s++tkfCy+nny+
OGLUM01G30020.1 79 PLPCPRCGSRETKFCYFNNYND 100
689*****************95 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 132 aa Download sequence |
MANLPSTAAA DASGFKLFGK VIQPDGQRGV EESAAAQAPP HPHPPAPPVM EAAAAGTSQT 60 LQAAGGGGGG GGGGGGGEPL PCPRCGSRET KFCYFNNYND SFGGQMDEAS NERDKKRKFG 120 NLGAFKIGRQ FK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G47655.1 | 1e-08 | Dof family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OGLUM01G30020.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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