PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G38110.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 235aa    MW: 24270.5 Da    PI: 9.9084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G38110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.6e-213283156
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     ++y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  OGLUM01G38110.1 32 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 83
                     68********.**********83...36*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MAPRAATVEK VAVAPPTGLG LGVGGGVGAG GPHYRGVRKR PWGRYAAEIR DPAKKSRVWL  60
GTYDTAEEAA RAYDAAAREF RGAKAKTNFP FASQSMVDCG GSPSSNSTVD TGGGGVQTPM  120
RAMPLPPTLD LDLFHRAAAV TAVAGTGVRF PFRGYPVARP ATHPYFFYEQ AAAAAAAAAG  180
YRMMKLAPPV TVAAVAQSDS DSSSVVDLAP SPPAVTANKA AAFDLDLNRP PPVEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-22ERF family protein