PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G38420.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 221aa MW: 24682.1 Da PI: 6.8766

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G38420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	9.7e-11	67	116	1	50
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 e+el+++r+ NReA r++R++Kka + Lee+vk+L + N++L +l+ OGLUM01G38420.1 67 EEELRKTRKPLGNREAVRKYREKKKAHAAFLEEEVKKLRTTNQQLLRRLQ 116 789******************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MVHLPIPSHL LFSHPEISHG FDELLKNTTT CTHSHTCNPP GPSVAMHTHT CLHTHIQVMA 60 SGENNVEEEL RKTRKPLGNR EAVRKYREKK KAHAAFLEEE VKKLRTTNQQ LLRRLQGHIS 120 LEAEVVRLRA LLFDIRGKID AEIGTFPFQK QCSFGSVTCT DHSPCFNTST EVAVREESSR 180 PTIVDCGIDG TGIISHELDI PEMVNSVDVI PSFVNSASLT E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	2e-32	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G38420.1