PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G42380.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 256aa    MW: 28291.5 Da    PI: 5.1884
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G42380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.82.8e-4291422128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 
                      +pGfrF Pt+eel+++yL++k++g + ++e+vi+ +d+y+v+P +L +         +   e + w++F++r++++a+g r++r+t sgyWka 
  OGLUM01G42380.1   9 APGFRFYPTEEELICFYLRNKLDGLRDDIERVIPVFDVYSVDPLQLSEihhemlG--GggeEGEPWFYFCPRQEREARGGRPSRTTPSGYWKAA 100
                      59***************************99***************854555431..14335669***************************** PP

              NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      g+   v+s++++ +g+kkt+vfy+grap+g+kt W m+eyr+
  OGLUM01G42380.1 101 GTPGVVYSADRRPIGMKKTMVFYRGRAPSGTKTAWKMNEYRA 142
                      ****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MADGGGRRAP GFRFYPTEEE LICFYLRNKL DGLRDDIERV IPVFDVYSVD PLQLSEIHHE  60
MLGGGGEEGE PWFYFCPRQE REARGGRPSR TTPSGYWKAA GTPGVVYSAD RRPIGMKKTM  120
VFYRGRAPSG TKTAWKMNEY RAFHYPDASS ASASSAGAAA PPNHLPPQLR SEFSLCRLYT  180
RSGGIRQFDR RPLAGGGDEN PGPSMAAAAA SPEENDGSGC SMQQLELMDQ GGAVDPDWDQ  240
WDDLATLTAL LYWPRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-61NAC family protein