PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G42610.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 329aa MW: 34746.5 Da PI: 4.5977

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G42610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.6	5.6e-38	33	89	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprCds ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ OGLUM01G42610.1 33 VPNCPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 89 568***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MLSSSHHEAM LPYAPRPPSL LVDRRYKQGA EAVPNCPRCD SPNTKFCYYN NYSLSQPRYF 60 CKGCRRYWTK GGSLRNVPVG GGCRKNRRGK SSSSARSAAD AVSSGRDAAF GHRFPGPVRP 120 DMVLEGMVGN PANPGQAMPD VAAAADGSTI DLAMLYAKFL NHPPTDAGLG AVTPESGGHV 180 DEAFDTFSAS SDPSPGILAA ASAQFDPSQD GFGEWSSPAS GNDPTSTATT ATTSMLCTDA 240 SVQAALGELN FAMDQSCFDS LGLPTDVAGA GSLSSWCSIV PSLSTWEEPK YDSLDSFPDD 300 AMSLHECMIG APDHDWSVDC QGLEALYMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-29	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G42610.1