PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G48010.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 150aa    MW: 16874.1 Da    PI: 6.7712
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G48010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.55.3e-101779465
              NAM  4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrd 65
                     G+ F+Pt++el+ ++L+++++g   +++ ++ e+d + + Pw+L +++  +e+ + y F  r 
  OGLUM01G48010.1 17 GVGFEPTEDELMLHFLRPQLRGFAPRVAGAVVEADPCGAAPWELLARHGRREEGInYCFYVRG 79
                     999*********************9**999**************8665555554456665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MGKEMNLIRE DEYGGGGVGF EPTEDELMLH FLRPQLRGFA PRVAGAVVEA DPCGAAPWEL  60
LARHGRREEG INYCFYVRGE MGQQRSTGWM MAEYEITDPR CYRRADDGEE DDFWVLCHVR  120
KSSRPSAAKI SPAKPARRRK PTAAADVRAA