PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G02590.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 162aa MW: 16823.9 Da PI: 7.5194

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G02590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.2	3.1e-12	36	79	4	47
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r+ +NRe+ArrsR RK+ ++ L+ v+ L eN + OGLUM02G02590.1 36 QRRAKRMLSNRESARRSRMRKQRHLDDLTAQVAHLRRENAHVAT 79 689************************************87664 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MASSSGSGGS AVSAATAAAG GSSSAAEEEL RALMEQRRAK RMLSNRESAR RSRMRKQRHL 60 DDLTAQVAHL RRENAHVATA LGLTTQGLLA VDAENAVLRT QAAELAARLA SLNDILSCIN 120 TNGAAAAAAA LTVAAATDPL LAFDSAAFDD LFRSSPELFQ LC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	57	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	3e-28	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G02590.1