PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G04330.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 214aa    MW: 21748.1 Da    PI: 6.9095
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G04330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-182373256
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     +y+GVr+++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++aa+++l+g+
  OGLUM02G04330.1 23 RYRGVRRRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAARSLRGA 73
                     69*******.7*********83...36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MRRARLPPAA AMAGVGVGEG EVRYRGVRRR PSGRYAAEIR DPAKKTPIWL GTFDSAEAAA  60
RAYDAAARSL RGAAARTNFP PSTSSSAPPP PPPQHQPPQH LPPAAAAATS SHSSTVESWG  120
VTVAAAAASA GALGLPPPRN GGSNPAADED CRSYCGSSSS VLCEDGASGA GDEAAAPRCS  180
PLPFDLNLPA SSPSAAAAAE ADEMDWRCDT LLHL