PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G05030.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 235aa MW: 25756.7 Da PI: 9.4843

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G05030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90	2.1e-28	33	86	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rW +eLH+rF +av++LGG ++AtPk+i++lm+ kg++++hvkSHLQ+YR OGLUM02G05030.1 33 PRMRWPEELHRRFAHAVRRLGGCHEATPKRIMQLMGAKGVSISHVKSHLQMYRN 86 9****************************************************6 PP
2	Myb_DNA-binding	47.8	3.2e-15	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW +e++ ++++av++lGg t+k+I++ mg kg + ++ks++q+y+ OGLUM02G05030.1 34 RMRWPEELHRRFAHAVRRLGGCheaTPKRIMQLMGaKGVSISHVKSHLQMYR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGARGRRDRM GSAGGGGGSP PVVVRRYNRS EAPRMRWPEE LHRRFAHAVR RLGGCHEATP 60 KRIMQLMGAK GVSISHVKSH LQMYRNSNNS SNVNRRHPVT PQIDWTTTAQ QDEQQRRQMS 120 SFSFLATRTV PAAGIGSHSH QRPHRRQALH AGDDDGCELT LSISGGAAEE SKDGGSSITD 180 DDDELLIQPP APNIINDDGS TRHGHRHPFA CSTQPPPPAA INLELTISSP CCWLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	6e-20	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G05030.1